--- title: "AtWork & Paychex: Simplifying Business Operations Together" description: "Paychex & AtWork Systems: scalable, efficient business solutions. Paychex HR, payroll, & benefits integrated with AtWork Systems' integrated ERP OneLynk." image: https://www.atworksys.com/hubfs/paychex-2.png --- [Skip to content](https://www.atworksys.com/blog/atwork-paychex-simplifying-business#main-content) [![AtWork-2160x1080](https://www.atworksys.com/hs-fs/hubfs/AtWork-2160x1080.png?width=150&name=AtWork-2160x1080.png)](https://www.atworksys.com/) - Solutions - [Managed Services](https://www.atworksys.com/govcon-managed-services) - [OneLynk GovCon ERP](https://www.atworksys.com/onelynk) - [Time to Upgrade Your ERP?](https://www.atworksys.com/upgrade-your-erp) - [Partners](https://www.atworksys.com/partners) - Resources - [Blog](https://www.atworksys.com/blog) - GovCon Source - [GovCon Source Home](https://www.atworksys.com/govcon-source) - [Lean & Agile in the Age of DOGE](https://www.atworksys.com/lean-and-agile-in-the-age-of-doge) - [Service Contract Act (SCA)](https://www.atworksys.com/service-contract-act-sca-frequently-asked-questions) - [DCAA Compliant Accounting](https://www.atworksys.com/dcaa-compliance-govcon-accounting) - [GovCon Outsourcing & Managed Services](https://www.atworksys.com/govcon-managed-services) - [Government ERP Systems](https://www.atworksys.com/government-erp-systems) - [Veteran-Owned Small Businesses](https://www.atworksys.com/veteran-owned-small-business) - [GovCon CyberSecurity](https://www.atworksys.com/govcon-cybersecurity-compliance) - [Graduating 8(a) Program](https://www.atworksys.com/graduating-8a-program) - [SBIRs & Grants](https://www.atworksys.com/sbirs-and-grants) - [GovCon Growth Strategies](https://www.atworksys.com/govcon-growth-strategies-frequently-asked-questions) - [GovCon Compliance Audits](https://www.atworksys.com/govcon-compliance-reviews-audits) - [Webinars](https://www.atworksys.com/blog/atwork-webinars) - [DCAA Compliance](https://www.atworksys.com/dcaa-compliance-govcon-accounting) - [GovCon Accounting](https://www.atworksys.com/dcaa-compliance-govcon-accounting) - [Graduating 8(a) Program](https://www.atworksys.com/graduating-8a-program) - [Service Contract Act (SCA)](https://www.atworksys.com/service-contract-act-sca-frequently-asked-questions) - [GovCon Managed Services](https://www.atworksys.com/govcon-managed-services) - [Government ERP Systems](https://www.atworksys.com/government-erp-systems) - [GovCon Reviews & Audits](https://www.atworksys.com/govcon-compliance-reviews-audits) - [Cybersecurity Compliance](https://www.atworksys.com/govcon-cybersecurity-compliance) - [Government Grants & Contracts](https://www.atworksys.com/managing-government-grants-contracts) - Company - [Who We Are](https://www.atworksys.com/our-team) - [Contact Us](https://www.atworksys.com/contact-us) [Schedule a Discovery Call](https://calendly.com/ron-lewis-atworksys/meet-with-ron-lewis-atwork-systems) - Solutions - [Managed Services](https://www.atworksys.com/govcon-managed-services) - [OneLynk GovCon ERP](https://www.atworksys.com/onelynk) - [Time to Upgrade Your ERP?](https://www.atworksys.com/upgrade-your-erp) - [Partners](https://www.atworksys.com/partners) - Resources - [Blog](https://www.atworksys.com/blog) - GovCon Source - [GovCon Source Home](https://www.atworksys.com/govcon-source) - [Lean & Agile in the Age of DOGE](https://www.atworksys.com/lean-and-agile-in-the-age-of-doge) - [Service Contract Act (SCA)](https://www.atworksys.com/service-contract-act-sca-frequently-asked-questions) - [DCAA Compliant Accounting](https://www.atworksys.com/dcaa-compliance-govcon-accounting) - [GovCon Outsourcing & Managed Services](https://www.atworksys.com/govcon-managed-services) - [Government ERP Systems](https://www.atworksys.com/government-erp-systems) - [Veteran-Owned Small Businesses](https://www.atworksys.com/veteran-owned-small-business) - [GovCon CyberSecurity](https://www.atworksys.com/govcon-cybersecurity-compliance) - [Graduating 8(a) Program](https://www.atworksys.com/graduating-8a-program) - [SBIRs & Grants](https://www.atworksys.com/sbirs-and-grants) - [GovCon Growth Strategies](https://www.atworksys.com/govcon-growth-strategies-frequently-asked-questions) - [GovCon Compliance Audits](https://www.atworksys.com/govcon-compliance-reviews-audits) - [Webinars](https://www.atworksys.com/blog/atwork-webinars) - [DCAA Compliance](https://www.atworksys.com/dcaa-compliance-govcon-accounting) - [GovCon Accounting](https://www.atworksys.com/dcaa-compliance-govcon-accounting) - [Graduating 8(a) Program](https://www.atworksys.com/graduating-8a-program) - [Service Contract Act (SCA)](https://www.atworksys.com/service-contract-act-sca-frequently-asked-questions) - [GovCon Managed Services](https://www.atworksys.com/govcon-managed-services) - [Government ERP Systems](https://www.atworksys.com/government-erp-systems) - [GovCon Reviews & Audits](https://www.atworksys.com/govcon-compliance-reviews-audits) - [Cybersecurity Compliance](https://www.atworksys.com/govcon-cybersecurity-compliance) - [Government Grants & Contracts](https://www.atworksys.com/managing-government-grants-contracts) - Company - [Who We Are](https://www.atworksys.com/our-team) - [Contact Us](https://www.atworksys.com/contact-us) [Schedule a Discovery Call](https://calendly.com/ron-lewis-atworksys/meet-with-ron-lewis-atwork-systems) [mailto:?subject=Check%20out%20https://www.atworksys.com/blog/atwork-paychex-simplifying-business](mailto:?subject=Check%20out%20https://www.atworksys.com/blog/atwork-paychex-simplifying-business) October 15, 2025 # AtWork & Paychex: Simplifying Business Operations Together Written by: [Ron Lewis](https://www.atworksys.com/blog/author/ron-lewis) Paychex and AtWork Systems have joined forces to deliver scalable, efficient solutions for businesses. Combining Paychex's expertise in HR, payroll, and benefits with AtWork Systems' integrated ERP tools and managed services, this partnership empowers organizations to streamline operations, ensure compliance, and drive growth. ## Why AtWork?  - ![](https://www.atworksys.com/hubfs/image-png-3.png)**We Empower Companies:** To achieve compliance and stay competitive by streamlining operations through managed services, fractional resources and an integrated, audit-ready ERP platform that reduces risk, lowers costs, and enhances efficiency. - **Integrated Suite of Tools:** OneLynk provides a comprehensive suite for contract and project lifecycle management, crucial for handling government contracts efficiently. - **Compliance with DCAA:** AtWork Systems' solutions ensure compliance with Defense Contract Audit Agency (DCAA) requirements, which is essential for government contracting. - **Cost Efficiency:** Implementation of AtWork Systems' managed services and ERP solutions can significantly reduce back-office costs by automating and streamlining operations. - **Improved Competitiveness:** By freeing up resources and reducing indirect costs, AtWork Systems helps businesses become more competitive in securing government contracts. ### Services We Manage - Finance & Accounting - Time & Expense, - Procurement & Orders - Invoicing & Billing - Contracts & Projects - Employee/Manager Services - Compliance & Security - Business Analytics ### Your Compliance Covered - DCAA-Ready Accounting - FAR and CAS Compliance - Automated Indirect Rate Management - Real-Time Audit Readiness - Integrated Labor and Time Tracking ### Contract Types We Support - Cost-Reimbursement (e.g., Cost-Plus-Fixed-Fee, Cost-Plus-Award-Fee) - Time and Materials (T&M) - Firm-Fixed-Price (FFP) - Fixed-Price with Incentive Labor Hour - SCA Contracts   ## Complete AtWork Managed Services and ERP Portfolio ![Flexible Subscriptions](https://www.atworksys.com/hubfs/nbimages/icons/Business-Products%20-%20Business%20-%20cash-molecule.svg) ### Managed Services - Offers on-demand access to fractional resources: CFOs, Controllers, HR, Project and Contracts professionals. - Scales support based on business size and complexity. - Provides managed services for accounting, HR, payroll, compliance, and cybersecurity. - Meet your DCAA, FAR, and CMMC compliance without full-time staff. - You focus on growth while AtWork experts handle the back-office functions. ![Flexible Subscriptions](https://www.atworksys.com/hubfs/nbimages/icons/Business-Products%20-%20Business%20-%20cash-molecule.svg) ### Finance & Accounting - Real-time visibility into financials, including P&L, balance sheet, and cash flow. - Handles cost allocations and indirect rates. - Automates billing based on Contracts. - Built-in controls for GAAP and FAR/DFARS compliance. - Integrates with bank feeds, payroll, AP/AR, and project costing. ![Mobile Accessibility](https://www.atworksys.com/hubfs/nbimages/icons/Programming-Apps-Websites%20-%20Responsive-Design%20-%20responsive-design.svg) ### Time & Expense - DCAA-compliant timekeeping system with audit trails. - Supports complex labor categories, cost pools, and project-based time allocations. - Integration with payroll, invoicing, and job costing. - Approval workflows and policies for expenses and labor charges. ![Business-Products - Strategy - target-center-1](https://www.atworksys.com/hubfs/nbimages/icons/Business-Products%20-%20Strategy%20-%20target-center-1.svg) ### Contracts & Projects - Links project plans to contract deliverables, funding, and compliance requirements. - Tracks direct and indirect costs in real-time across labor, materials, and subcontractors. - Supports WBS and CLIN management for government projects. - Automates billing and reporting in accordance with contract types and terms. ![Business-Products - Business-Deals - business-deal-handshake-circle](https://www.atworksys.com/hubfs/nbimages/icons/Business-Products%20-%20Business-Deals%20-%20business-deal-handshake-circle.svg) ### Procurement & Orders - Automates procure-to-pay cycle with requisition, PO creation, and vendor management. - Tracks funding sources, contracts, and budgets to ensure compliant procurement. - Integrates with finance for real-time budget visibility and invoice matching. - Enables government contractors to track small business and subcontractor participation. ![Security](https://www.atworksys.com/hubfs/nbimages/icons/Programming-Apps-Websites%20-%20Bug-Security%20-%20shield-unlock.svg) ### Compliance & Security - Built-in support for DCAA, NIST 800-171 and CMMC readiness assessments. - Maintains secure documentation of system security plans and remediation steps. - Aligns IT practices with government cybersecurity requirements for federal contractors. ![Business-Products - Performances - performance-presentation-graph](https://www.atworksys.com/hubfs/nbimages/icons/Business-Products%20-%20Performances%20-%20performance-presentation-graph.svg) ### Business Analytics - Custom dashboards for executives, project managers, HR, and finance teams. - Provides KPIs and drill-downs across projects, contracts, profitability, and compliance. - Supports predictive analytics for cash flow, labor needs, and indirect rate trends. - Real-time data visualization to drive faster, data-informed decision- making. ![Flexible Subscriptions](https://www.atworksys.com/hubfs/nbimages/icons/Business-Products%20-%20Business%20-%20cash-molecule.svg) ### Human Resources - Integrated HR and Benefits Management that streamlines HR functions like onboarding, benefits enrollment, and compliance tracking. - Employee Self-Service and Automation for secure access to update personal information, view benefits, and manage documents. - Advanced Financial Calculations for HR Impact: Real-time labor cost allocation, fringe benefit burdening, and indirect rate calculations to ensure accurate payroll, benefits funding, and compliance reporting. ## [![Schedule a Discovery Call](https://no-cache.hubspot.com/cta/default/21260931/interactive-128030714015.png)](https://www.atworksys.com/hs/cta/wi/redirect?encryptedPayload=AVxigLJugn6fiSMe4RvPjwzrpX4n3xF7RjSZOHOxuBle%2FFcFAmSiGNHR7ivBVNcKQkRTtlfqIR1X2UQNJvS4zj5Oy4cs%2F%2FgbYz%2BqjF3f4GL3SbN0e%2BHlXSEMpu1WnqV5mJoi19C72EKRvf1QQMLvcrrClQjliqc5yAEuXXOdZq%2B0AUsnNuoIzcqXXnJd1mUOqtZ1VoC5lmkf2QfpolNJIb52OCTVm%2F61875%2BKPhTZF4QPQ%3D%3D&webInteractiveContentId=128030714015&portalId=21260931) ## Why Paychex? - ![](https://www.atworksys.com/hubfs/image-png-4.png)Customized solutions to meet your client’s unique needs and cater to your size, industry, location, goals, and culture - Personalized guidance and actionable HR advice based on your client’s needs - Award-winning technology to help you simplify your client’s employee benefits, free up time and resources, and create more efficient processes - 50 years of experience providing technology and service solutions to simplify the complexity of running a business ## Complete Paychex HCM PEO Portfolio ![Business-Products - Strategy - target-center-1](https://www.atworksys.com/hubfs/nbimages/icons/Business-Products%20-%20Strategy%20-%20target-center-1.svg) ### Complete Benefits Solution - **Comprehensive Benefits Admin** Paychex offers a wide range of employee benefits services, including health, dental, vision, life, and disability insurance, with seamless integration into payroll and HR systems. - **Retirement Services** Offers 401(k) plan administration and fiduciary support, helping businesses attract and retain talent with competitive retirement options. - **Benefits Self-Service Portal** Employees can manage their benefits, view plan details, and make enrollment changes through an intuitive online and mobile platform. ![Business-Products - Business - cash-molecule](https://www.atworksys.com/hubfs/nbimages/icons/Business-Products%20-%20Business%20-%20cash-molecule.svg) ### Payroll - Record-keeping - Direct Deposit & Debit Card Payment Options - Job Costing - Garnishments & Other Deductions - TaxManagement - GeneralLedger - Reports - Expense Management - Time & Attendance ![Programming-Apps-Websites - Plugins-Modules - module-three-1](https://www.atworksys.com/hubfs/nbimages/icons/Programming-Apps-Websites%20-%20Plugins-Modules%20-%20module-three-1.svg) ### Health & Ancillary Benefits - Health Insurance - Minimum Essential Coverage - GAP - Telemedicine - Dental - Vision - Life / AD&D - Short- & Long-Term Disability ![Business-Products - Strategy - strategy-split](https://www.atworksys.com/hubfs/nbimages/icons/Business-Products%20-%20Strategy%20-%20strategy-split.svg) ### Additional Benefits - Health Advocacy Services - Health Savings Account - Flexible Spending Account - Transit Section 132 Plan - College Savings Program - Employee Assistance Plan - 401(k) - Employee Discount Program - Financial Wellness Program - Legal Plan ![Security](https://www.atworksys.com/hubfs/nbimages/icons/Programming-Apps-Websites%20-%20Bug-Security%20-%20shield-unlock.svg) ### Risk Management - Workers’ Compensation Insurance - Safety & Loss Services - Federal & State Employment Law - Compliance Assistance - Protection Plus - Employment Forms & Posters ![Business-Products - Performances - performance-presentation-graph](https://www.atworksys.com/hubfs/nbimages/icons/Business-Products%20-%20Performances%20-%20performance-presentation-graph.svg) ### Tax Credits - Custom dashboards for executives, project managers, HR, and finance teams. - Provides KPIs and drill-downs across projects, contracts, profitability, and compliance. - Supports predictive analytics for cash flow, labor needs, and indirect rate trends. - Real-time data visualization to drive faster, data-informed decision- making. ![Business-Products - Analytics - analytics-pie-2](https://www.atworksys.com/hubfs/nbimages/icons/Business-Products%20-%20Analytics%20-%20analytics-pie-2.svg) ### Administration - Workers’ Compensation Insurance - Safety & Loss Services - Federal & State Employment Law - Compliance Assistance - Protection Plus - Employment Forms & Posters - Unemployment Claims ## [![Schedule a Discovery Call](https://no-cache.hubspot.com/cta/default/21260931/interactive-128030714015.png)](https://www.atworksys.com/hs/cta/wi/redirect?encryptedPayload=AVxigLJugn6fiSMe4RvPjwzrpX4n3xF7RjSZOHOxuBle%2FFcFAmSiGNHR7ivBVNcKQkRTtlfqIR1X2UQNJvS4zj5Oy4cs%2F%2FgbYz%2BqjF3f4GL3SbN0e%2BHlXSEMpu1WnqV5mJoi19C72EKRvf1QQMLvcrrClQjliqc5yAEuXXOdZq%2B0AUsnNuoIzcqXXnJd1mUOqtZ1VoC5lmkf2QfpolNJIb52OCTVm%2F61875%2BKPhTZF4QPQ%3D%3D&webInteractiveContentId=128030714015&portalId=21260931) ## Your Support Team ![group of successful business people standing in a row](https://img.freepik.com/premium-photo/group-successful-business-people-standing-row_252847-32012.jpg) ### Will Support You at Every Step From Strategy to Execution ### Client Advocate Acts as primary point of contact who understands your business, recommends solutions and strategies to achieve goals, and helps optimize the PEO services. ### HR Business Partner Provides proactive guidance and actionable HR advice based on your HR needs throughout the employee life cycle. ### Payroll Specialist Administers and processes payroll and related services, such as pay rate changes, quality assurance review, payroll reports, and more. ### Business Operations Provides an integrated business operations platform that streamlines project management, financials, HR, and procurement—empowering government contractors to run efficiently and scale with confidence. ### Benefits Supports you during onboarding and annual enrollment to provide information and updates. Also provides help to select benefits packages that match your company and employee needs. ### Compliance Team Monitors federal and state laws and regulations to inform and support your service team, including built-in DCAA and FAR compliance and real-time monitoring and reporting. [![Schedule a Discovery Call](https://no-cache.hubspot.com/cta/default/21260931/interactive-128030714015.png)](https://www.atworksys.com/hs/cta/wi/redirect?encryptedPayload=AVxigLJugn6fiSMe4RvPjwzrpX4n3xF7RjSZOHOxuBle%2FFcFAmSiGNHR7ivBVNcKQkRTtlfqIR1X2UQNJvS4zj5Oy4cs%2F%2FgbYz%2BqjF3f4GL3SbN0e%2BHlXSEMpu1WnqV5mJoi19C72EKRvf1QQMLvcrrClQjliqc5yAEuXXOdZq%2B0AUsnNuoIzcqXXnJd1mUOqtZ1VoC5lmkf2QfpolNJIb52OCTVm%2F61875%2BKPhTZF4QPQ%3D%3D&webInteractiveContentId=128030714015&portalId=21260931) ## Other posts you might be interested in [View All Posts](https://www.atworksys.com/blog) ## [12 min read | October 15, 2025 AtWork & Paychex: Simplifying Business Operations Together Read More](https://www.atworksys.com/blog/atwork-paychex-simplifying-business) ## [5 min read | August 5, 2025 Now Is the Time to Replace QuickBooks, Unanet, and Deltek Read More](https://www.atworksys.com/blog/time-to-replace-quickbooks-unanet-deltek) ## [4 min read | August 4, 2025 From Firefighting to Forecasting: Automating Compliance and Audit Defense Read More](https://www.atworksys.com/blog/automating-forecasting-compliance-audit-defense) ## Meet with a Specialist Setup a discovery call and learn more about supercharging your GovCon business. 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